The Amphimedon queenslandica genome and the evolution of animal complexity
Identifieur interne : 006E74 ( Main/Exploration ); précédent : 006E73; suivant : 006E75The Amphimedon queenslandica genome and the evolution of animal complexity
Auteurs : Mansi Srivastava [États-Unis] ; Oleg Simakov [Allemagne] ; Jarrod Chapman [États-Unis] ; Bryony Fahey [Australie] ; Marie E. A. Gauthier [Australie] ; Therese Mitros [États-Unis] ; Gemma S. Richards [Australie] ; Cecilia Conaco [États-Unis] ; Michael Dacre [États-Unis] ; Uffe Hellsten [États-Unis] ; Claire Larroux [Australie] ; Nicholas H. Putnam [États-Unis] ; Mario Stanke [Allemagne] ; Maja Adamska [Australie] ; Aaron Darling [États-Unis] ; Sandie M. Degnan [Australie] ; Todd H. Oakley [États-Unis] ; David C. Plachetzki [États-Unis] ; Yufeng Zhai [États-Unis] ; Marcin Adamski [Australie] ; Andrew Calcino [Australie] ; Scott F. Cummins [Australie] ; David M. Goodstein [États-Unis] ; Christina Harris [Australie] ; Daniel J. Jackson [Australie] ; Sally P. Leys [Canada] ; Shengqiang Shu [États-Unis] ; Ben J. Woodcroft [Australie] ; Michel Vervoort [France] ; Kenneth S. Kosik [États-Unis] ; Gerard Manning [États-Unis] ; Bernard M. Degnan [Australie] ; Daniel S. Rokhsar [États-Unis]Source :
- Nature [ 0028-0836 ] ; 2010.
Abstract
Sponges are an ancient group of animals that diverged from other metazoans over 600 million years ago. Here we present the draft genome sequence of
Url:
DOI: 10.1038/nature09201
PubMed: 20686567
PubMed Central: 3130542
Affiliations:
- Allemagne, Australie, Canada, France, États-Unis
- Bade-Wurtemberg, Basse-Saxe, Californie, District de Karlsruhe, Île-de-France
- Göttingen, Heidelberg, Paris, Santa Barbara (Californie)
- Université Paris Diderot-Paris 7, Université de Californie à Santa Barbara
Links toward previous steps (curation, corpus...)
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- to stream Ncbi, to step Curation: 000847
- to stream Ncbi, to step Checkpoint: 000847
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Le document en format XML
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Oakley</name><affiliation wicri:level="4"><nlm:aff id="A10">Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Plachetzki, David C" sort="Plachetzki, David C" uniqKey="Plachetzki D" first="David C." last="Plachetzki">David C. Plachetzki</name><affiliation wicri:level="4"><nlm:aff id="A10">Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Zhai, Yufeng" sort="Zhai, Yufeng" uniqKey="Zhai Y" first="Yufeng" last="Zhai">Yufeng Zhai</name><affiliation wicri:level="1"><nlm:aff id="A6">Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037</wicri:regionArea><wicri:noRegion>California 92037</wicri:noRegion></affiliation></author><author><name sortKey="Adamski, Marcin" sort="Adamski, Marcin" uniqKey="Adamski M" first="Marcin" last="Adamski">Marcin Adamski</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Calcino, Andrew" sort="Calcino, Andrew" uniqKey="Calcino A" first="Andrew" last="Calcino">Andrew Calcino</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Cummins, Scott F" sort="Cummins, Scott F" uniqKey="Cummins S" first="Scott F." last="Cummins">Scott F. Cummins</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Goodstein, David M" sort="Goodstein, David M" uniqKey="Goodstein D" first="David M." last="Goodstein">David M. Goodstein</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Harris, Christina" sort="Harris, Christina" uniqKey="Harris C" first="Christina" last="Harris">Christina Harris</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Jackson, Daniel J" sort="Jackson, Daniel J" uniqKey="Jackson D" first="Daniel J." last="Jackson">Daniel J. Jackson</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Leys, Sally P" sort="Leys, Sally P" uniqKey="Leys S" first="Sally P." last="Leys">Sally P. Leys</name><affiliation wicri:level="1"><nlm:aff id="A11">Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9</wicri:regionArea><wicri:noRegion>Alberta T6G 2E9</wicri:noRegion></affiliation></author><author><name sortKey="Shu, Shengqiang" sort="Shu, Shengqiang" uniqKey="Shu S" first="Shengqiang" last="Shu">Shengqiang Shu</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Woodcroft, Ben J" sort="Woodcroft, Ben J" uniqKey="Woodcroft B" first="Ben J." last="Woodcroft">Ben J. Woodcroft</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Vervoort, Michel" sort="Vervoort, Michel" uniqKey="Vervoort M" first="Michel" last="Vervoort">Michel Vervoort</name><affiliation wicri:level="4"><nlm:aff id="A12">Development and Neurobiology program Institut Jacques Monod, UMR 7592 CNRS/Université Paris Diderot-Paris 7, 75205 Paris Cedex 13, France.</nlm:aff><country xml:lang="fr" wicri:curation="lc">France</country><wicri:regionArea>Development and Neurobiology program Institut Jacques Monod, UMR 7592 CNRS/Université Paris Diderot-Paris 7, 75205 Paris Cedex 13</wicri:regionArea><wicri:noRegion>75205 Paris Cedex 13</wicri:noRegion><orgName type="university">Université Paris Diderot-Paris 7</orgName><placeName><settlement type="city">Paris</settlement><region type="region" nuts="2">Île-de-France</region></placeName></affiliation></author><author><name sortKey="Kosik, Kenneth S" sort="Kosik, Kenneth S" uniqKey="Kosik K" first="Kenneth S." last="Kosik">Kenneth S. 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Rokhsar</name><affiliation wicri:level="1"><nlm:aff id="A1">Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720</wicri:regionArea><wicri:noRegion>California 94720</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">20686567</idno><idno type="pmc">3130542</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3130542</idno><idno type="RBID">PMC:3130542</idno><idno type="doi">10.1038/nature09201</idno><date when="2010">2010</date><idno type="wicri:Area/Pmc/Corpus">001532</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">001532</idno><idno type="wicri:Area/Pmc/Curation">001392</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">001392</idno><idno type="wicri:Area/Pmc/Checkpoint">002458</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">002458</idno><idno type="wicri:Area/Ncbi/Merge">000847</idno><idno type="wicri:Area/Ncbi/Curation">000847</idno><idno type="wicri:Area/Ncbi/Checkpoint">000847</idno><idno type="wicri:Area/Main/Merge">007358</idno><idno type="wicri:Area/Main/Curation">006E74</idno><idno type="wicri:Area/Main/Exploration">006E74</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">The <italic>Amphimedon queenslandica</italic> genome and the evolution of animal complexity</title><author><name sortKey="Srivastava, Mansi" sort="Srivastava, Mansi" uniqKey="Srivastava M" first="Mansi" last="Srivastava">Mansi Srivastava</name><affiliation wicri:level="1"><nlm:aff id="A1">Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720</wicri:regionArea><wicri:noRegion>California 94720</wicri:noRegion></affiliation></author><author><name sortKey="Simakov, Oleg" sort="Simakov, Oleg" uniqKey="Simakov O" first="Oleg" last="Simakov">Oleg Simakov</name><affiliation wicri:level="3"><nlm:aff id="A2">Molecular Evolution Genomics, University of Heidelberg, Heidelberg, Germany.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Allemagne</country><wicri:regionArea>Molecular Evolution Genomics, University of Heidelberg, Heidelberg</wicri:regionArea><placeName><region type="land" nuts="1">Bade-Wurtemberg</region><region type="district" nuts="2">District de Karlsruhe</region><settlement type="city">Heidelberg</settlement></placeName></affiliation></author><author><name sortKey="Chapman, Jarrod" sort="Chapman, Jarrod" uniqKey="Chapman J" first="Jarrod" last="Chapman">Jarrod Chapman</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Fahey, Bryony" sort="Fahey, Bryony" uniqKey="Fahey B" first="Bryony" last="Fahey">Bryony Fahey</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Gauthier, Marie E A" sort="Gauthier, Marie E A" uniqKey="Gauthier M" first="Marie E. A." last="Gauthier">Marie E. A. Gauthier</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Mitros, Therese" sort="Mitros, Therese" uniqKey="Mitros T" first="Therese" last="Mitros">Therese Mitros</name><affiliation wicri:level="1"><nlm:aff id="A1">Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720</wicri:regionArea><wicri:noRegion>California 94720</wicri:noRegion></affiliation></author><author><name sortKey="Richards, Gemma S" sort="Richards, Gemma S" uniqKey="Richards G" first="Gemma S." last="Richards">Gemma S. Richards</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Conaco, Cecilia" sort="Conaco, Cecilia" uniqKey="Conaco C" first="Cecilia" last="Conaco">Cecilia Conaco</name><affiliation wicri:level="4"><nlm:aff id="A5">Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Dacre, Michael" sort="Dacre, Michael" uniqKey="Dacre M" first="Michael" last="Dacre">Michael Dacre</name><affiliation wicri:level="1"><nlm:aff id="A6">Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037</wicri:regionArea><wicri:noRegion>California 92037</wicri:noRegion></affiliation></author><author><name sortKey="Hellsten, Uffe" sort="Hellsten, Uffe" uniqKey="Hellsten U" first="Uffe" last="Hellsten">Uffe Hellsten</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Larroux, Claire" sort="Larroux, Claire" uniqKey="Larroux C" first="Claire" last="Larroux">Claire Larroux</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Putnam, Nicholas H" sort="Putnam, Nicholas H" uniqKey="Putnam N" first="Nicholas H." last="Putnam">Nicholas H. Putnam</name><affiliation wicri:level="1"><nlm:aff id="A7">Department of Ecology and Evolutionary Biology, Rice University, 6100 Main Street, Houston, Texas 77005, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Ecology and Evolutionary Biology, Rice University, 6100 Main Street, Houston, Texas 77005</wicri:regionArea><wicri:noRegion>Texas 77005</wicri:noRegion></affiliation></author><author><name sortKey="Stanke, Mario" sort="Stanke, Mario" uniqKey="Stanke M" first="Mario" last="Stanke">Mario Stanke</name><affiliation wicri:level="3"><nlm:aff id="A8">Institut für Mikrobiologie und Genetik, Abteilung für Bioinformatik, Goldschmidtstr. 1, 37077 Göttingen, Germany.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Allemagne</country><wicri:regionArea>Institut für Mikrobiologie und Genetik, Abteilung für Bioinformatik, Goldschmidtstr. 1, 37077 Göttingen</wicri:regionArea><placeName><region type="land" nuts="2">Basse-Saxe</region><settlement type="city">Göttingen</settlement></placeName></affiliation></author><author><name sortKey="Adamska, Maja" sort="Adamska, Maja" uniqKey="Adamska M" first="Maja" last="Adamska">Maja Adamska</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Darling, Aaron" sort="Darling, Aaron" uniqKey="Darling A" first="Aaron" last="Darling">Aaron Darling</name><affiliation wicri:level="1"><nlm:aff id="A9">Genome Center, University of California-Davis, Davis, California 95616, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Genome Center, University of California-Davis, Davis, California 95616</wicri:regionArea><wicri:noRegion>California 95616</wicri:noRegion></affiliation></author><author><name sortKey="Degnan, Sandie M" sort="Degnan, Sandie M" uniqKey="Degnan S" first="Sandie M." last="Degnan">Sandie M. Degnan</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Oakley, Todd H" sort="Oakley, Todd H" uniqKey="Oakley T" first="Todd H." last="Oakley">Todd H. Oakley</name><affiliation wicri:level="4"><nlm:aff id="A10">Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Plachetzki, David C" sort="Plachetzki, David C" uniqKey="Plachetzki D" first="David C." last="Plachetzki">David C. Plachetzki</name><affiliation wicri:level="4"><nlm:aff id="A10">Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Zhai, Yufeng" sort="Zhai, Yufeng" uniqKey="Zhai Y" first="Yufeng" last="Zhai">Yufeng Zhai</name><affiliation wicri:level="1"><nlm:aff id="A6">Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037</wicri:regionArea><wicri:noRegion>California 92037</wicri:noRegion></affiliation></author><author><name sortKey="Adamski, Marcin" sort="Adamski, Marcin" uniqKey="Adamski M" first="Marcin" last="Adamski">Marcin Adamski</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Calcino, Andrew" sort="Calcino, Andrew" uniqKey="Calcino A" first="Andrew" last="Calcino">Andrew Calcino</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Cummins, Scott F" sort="Cummins, Scott F" uniqKey="Cummins S" first="Scott F." last="Cummins">Scott F. Cummins</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Goodstein, David M" sort="Goodstein, David M" uniqKey="Goodstein D" first="David M." last="Goodstein">David M. Goodstein</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Harris, Christina" sort="Harris, Christina" uniqKey="Harris C" first="Christina" last="Harris">Christina Harris</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Jackson, Daniel J" sort="Jackson, Daniel J" uniqKey="Jackson D" first="Daniel J." last="Jackson">Daniel J. Jackson</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Leys, Sally P" sort="Leys, Sally P" uniqKey="Leys S" first="Sally P." last="Leys">Sally P. Leys</name><affiliation wicri:level="1"><nlm:aff id="A11">Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9</wicri:regionArea><wicri:noRegion>Alberta T6G 2E9</wicri:noRegion></affiliation></author><author><name sortKey="Shu, Shengqiang" sort="Shu, Shengqiang" uniqKey="Shu S" first="Shengqiang" last="Shu">Shengqiang Shu</name><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author><author><name sortKey="Woodcroft, Ben J" sort="Woodcroft, Ben J" uniqKey="Woodcroft B" first="Ben J." last="Woodcroft">Ben J. Woodcroft</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Vervoort, Michel" sort="Vervoort, Michel" uniqKey="Vervoort M" first="Michel" last="Vervoort">Michel Vervoort</name><affiliation wicri:level="4"><nlm:aff id="A12">Development and Neurobiology program Institut Jacques Monod, UMR 7592 CNRS/Université Paris Diderot-Paris 7, 75205 Paris Cedex 13, France.</nlm:aff><country xml:lang="fr" wicri:curation="lc">France</country><wicri:regionArea>Development and Neurobiology program Institut Jacques Monod, UMR 7592 CNRS/Université Paris Diderot-Paris 7, 75205 Paris Cedex 13</wicri:regionArea><wicri:noRegion>75205 Paris Cedex 13</wicri:noRegion><orgName type="university">Université Paris Diderot-Paris 7</orgName><placeName><settlement type="city">Paris</settlement><region type="region" nuts="2">Île-de-France</region></placeName></affiliation></author><author><name sortKey="Kosik, Kenneth S" sort="Kosik, Kenneth S" uniqKey="Kosik K" first="Kenneth S." last="Kosik">Kenneth S. Kosik</name><affiliation wicri:level="4"><nlm:aff id="A5">Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, California 93106, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, California 93106</wicri:regionArea><orgName type="university">Université de Californie à Santa Barbara</orgName><placeName><settlement type="city">Santa Barbara (Californie)</settlement><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Manning, Gerard" sort="Manning, Gerard" uniqKey="Manning G" first="Gerard" last="Manning">Gerard Manning</name><affiliation wicri:level="1"><nlm:aff id="A6">Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Razavi Newman Center for Bioinformatics, Salk Institute for Biological Studies, La Jolla, California 92037</wicri:regionArea><wicri:noRegion>California 92037</wicri:noRegion></affiliation></author><author><name sortKey="Degnan, Bernard M" sort="Degnan, Bernard M" uniqKey="Degnan B" first="Bernard M." last="Degnan">Bernard M. Degnan</name><affiliation wicri:level="1"><nlm:aff id="A4">School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072, Australia.</nlm:aff><country xml:lang="fr" wicri:curation="lc">Australie</country><wicri:regionArea>School of Biological Sciences, The University of Queensland, Brisbane, Queensland 4072</wicri:regionArea><wicri:noRegion>Queensland 4072</wicri:noRegion></affiliation></author><author><name sortKey="Rokhsar, Daniel S" sort="Rokhsar, Daniel S" uniqKey="Rokhsar D" first="Daniel S." last="Rokhsar">Daniel S. Rokhsar</name><affiliation wicri:level="1"><nlm:aff id="A1">Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Center for Integrative Genomics and Department of Molecular and Cell Biology, University of California, Berkeley, California 94720</wicri:regionArea><wicri:noRegion>California 94720</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="A3">Department of Energy Joint Genome Institute, Walnut Creek, California 94598, USA.</nlm:aff><country xml:lang="fr" wicri:curation="lc">États-Unis</country><wicri:regionArea>Department of Energy Joint Genome Institute, Walnut Creek, California 94598</wicri:regionArea><wicri:noRegion>California 94598</wicri:noRegion></affiliation></author></analytic><series><title level="j">Nature</title><idno type="ISSN">0028-0836</idno><idno type="eISSN">1476-4687</idno><imprint><date when="2010">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p id="P2">Sponges are an ancient group of animals that diverged from other metazoans over 600 million years ago. Here we present the draft genome sequence of <italic>Amphimedon queenslandica</italic>, a demosponge from the Great Barrier Reef, and show that it is remarkably similar to other animal genomes in content, structure and organization. Comparative analysis enabled by the sequencing of the sponge genome reveals genomic events linked to the origin and early evolution of animals, including the appearance, expansion and diversification of pan-metazoan transcription factor, signalling pathway and structural genes. This diverse ‘toolkit’ of genes correlates with critical aspects of all metazoan body plans, and comprises cell cycle control and growth, development, somatic- and germ-cell specification, cell adhesion, innate immunity and allorecognition. Notably, many of the genes associated with the emergence of animals are also implicated in cancer, which arises from defects in basic processes associated with metazoan multicellularity.</p></div></front></TEI><affiliations><list><country><li>Allemagne</li><li>Australie</li><li>Canada</li><li>France</li><li>États-Unis</li></country><region><li>Bade-Wurtemberg</li><li>Basse-Saxe</li><li>Californie</li><li>District de Karlsruhe</li><li>Île-de-France</li></region><settlement><li>Göttingen</li><li>Heidelberg</li><li>Paris</li><li>Santa Barbara (Californie)</li></settlement><orgName><li>Université Paris Diderot-Paris 7</li><li>Université de Californie à Santa Barbara</li></orgName></list><tree><country name="États-Unis"><noRegion><name sortKey="Srivastava, Mansi" sort="Srivastava, Mansi" uniqKey="Srivastava M" first="Mansi" last="Srivastava">Mansi Srivastava</name></noRegion><name sortKey="Chapman, Jarrod" sort="Chapman, Jarrod" uniqKey="Chapman J" first="Jarrod" last="Chapman">Jarrod Chapman</name><name sortKey="Conaco, Cecilia" sort="Conaco, Cecilia" uniqKey="Conaco C" first="Cecilia" last="Conaco">Cecilia Conaco</name><name sortKey="Dacre, Michael" sort="Dacre, Michael" uniqKey="Dacre M" first="Michael" last="Dacre">Michael Dacre</name><name sortKey="Darling, Aaron" sort="Darling, Aaron" uniqKey="Darling A" first="Aaron" last="Darling">Aaron Darling</name><name sortKey="Goodstein, David M" sort="Goodstein, David M" uniqKey="Goodstein D" first="David M." last="Goodstein">David M. Goodstein</name><name sortKey="Hellsten, Uffe" sort="Hellsten, Uffe" uniqKey="Hellsten U" first="Uffe" last="Hellsten">Uffe Hellsten</name><name sortKey="Kosik, Kenneth S" sort="Kosik, Kenneth S" uniqKey="Kosik K" first="Kenneth S." last="Kosik">Kenneth S. Kosik</name><name sortKey="Manning, Gerard" sort="Manning, Gerard" uniqKey="Manning G" first="Gerard" last="Manning">Gerard Manning</name><name sortKey="Mitros, Therese" sort="Mitros, Therese" uniqKey="Mitros T" first="Therese" last="Mitros">Therese Mitros</name><name sortKey="Oakley, Todd H" sort="Oakley, Todd H" uniqKey="Oakley T" first="Todd H." last="Oakley">Todd H. Oakley</name><name sortKey="Plachetzki, David C" sort="Plachetzki, David C" uniqKey="Plachetzki D" first="David C." last="Plachetzki">David C. Plachetzki</name><name sortKey="Putnam, Nicholas H" sort="Putnam, Nicholas H" uniqKey="Putnam N" first="Nicholas H." last="Putnam">Nicholas H. Putnam</name><name sortKey="Rokhsar, Daniel S" sort="Rokhsar, Daniel S" uniqKey="Rokhsar D" first="Daniel S." last="Rokhsar">Daniel S. Rokhsar</name><name sortKey="Rokhsar, Daniel S" sort="Rokhsar, Daniel S" uniqKey="Rokhsar D" first="Daniel S." last="Rokhsar">Daniel S. Rokhsar</name><name sortKey="Shu, Shengqiang" sort="Shu, Shengqiang" uniqKey="Shu S" first="Shengqiang" last="Shu">Shengqiang Shu</name><name sortKey="Zhai, Yufeng" sort="Zhai, Yufeng" uniqKey="Zhai Y" first="Yufeng" last="Zhai">Yufeng Zhai</name></country><country name="Allemagne"><region name="Bade-Wurtemberg"><name sortKey="Simakov, Oleg" sort="Simakov, Oleg" uniqKey="Simakov O" first="Oleg" last="Simakov">Oleg Simakov</name></region><name sortKey="Stanke, Mario" sort="Stanke, Mario" uniqKey="Stanke M" first="Mario" last="Stanke">Mario Stanke</name></country><country name="Australie"><noRegion><name sortKey="Fahey, Bryony" sort="Fahey, Bryony" uniqKey="Fahey B" first="Bryony" last="Fahey">Bryony Fahey</name></noRegion><name sortKey="Adamska, Maja" sort="Adamska, Maja" uniqKey="Adamska M" first="Maja" last="Adamska">Maja Adamska</name><name sortKey="Adamski, Marcin" sort="Adamski, Marcin" uniqKey="Adamski M" first="Marcin" last="Adamski">Marcin Adamski</name><name sortKey="Calcino, Andrew" sort="Calcino, Andrew" uniqKey="Calcino A" first="Andrew" last="Calcino">Andrew Calcino</name><name sortKey="Cummins, Scott F" sort="Cummins, Scott F" uniqKey="Cummins S" first="Scott F." last="Cummins">Scott F. Cummins</name><name sortKey="Degnan, Bernard M" sort="Degnan, Bernard M" uniqKey="Degnan B" first="Bernard M." last="Degnan">Bernard M. Degnan</name><name sortKey="Degnan, Sandie M" sort="Degnan, Sandie M" uniqKey="Degnan S" first="Sandie M." last="Degnan">Sandie M. Degnan</name><name sortKey="Gauthier, Marie E A" sort="Gauthier, Marie E A" uniqKey="Gauthier M" first="Marie E. A." last="Gauthier">Marie E. A. Gauthier</name><name sortKey="Harris, Christina" sort="Harris, Christina" uniqKey="Harris C" first="Christina" last="Harris">Christina Harris</name><name sortKey="Jackson, Daniel J" sort="Jackson, Daniel J" uniqKey="Jackson D" first="Daniel J." last="Jackson">Daniel J. Jackson</name><name sortKey="Larroux, Claire" sort="Larroux, Claire" uniqKey="Larroux C" first="Claire" last="Larroux">Claire Larroux</name><name sortKey="Richards, Gemma S" sort="Richards, Gemma S" uniqKey="Richards G" first="Gemma S." last="Richards">Gemma S. Richards</name><name sortKey="Woodcroft, Ben J" sort="Woodcroft, Ben J" uniqKey="Woodcroft B" first="Ben J." last="Woodcroft">Ben J. Woodcroft</name></country><country name="Canada"><noRegion><name sortKey="Leys, Sally P" sort="Leys, Sally P" uniqKey="Leys S" first="Sally P." last="Leys">Sally P. Leys</name></noRegion></country><country name="France"><region name="Île-de-France"><name sortKey="Vervoort, Michel" sort="Vervoort, Michel" uniqKey="Vervoort M" first="Michel" last="Vervoort">Michel Vervoort</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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